Buffers {GeneR}R Documentation

Low level functions on buffer manipulation

Description

nSeq returns the limit of buffers to use, or set this limit to maxBuffers when specified.

freeSeq free sequence seqno and complementary. Free all sequences for freeAllSeq

Usage

freeSeq(seqno=0)
freeAllSeq()
nSeq(maxBuffers=NULL)

Arguments

seqno

Integer, sequence number to free. (bufseq)

maxBuffers

Integer/Scalar, number of buffers

Value

seqno; 0 for freeAllSeq. Number of sequences for nSeq

Author(s)

A.Viari, L Cotteret, A Lucas

Examples


placeString("ATGAGTGATGAGATGATGAG",seqno=0)
placeString("ATGAGTGATGAGATGATGAG",seqno=3)
placeString("ATGAGTGATGAGATGATGAG",seqno=4)
revComp()
revComp(seqno=3)

sizeSeq()
## show size used in all buffers
.seqSize()


## freeSeq(3)
## free buffer 3
.seqSize()


freeAllSeq()
## free all buffers
.seqSize()


## show number of availabel buffers:
nSeq()
# 100

## increase number of available buffers
nSeq(150)

.seqSize()

[Package GeneR version 2.24.0 Index]