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seqan Namespace Reference

Classes

struct  EquivalenceClassAA_
 
struct  FoundProteinFunctor
 
struct  SAValue< Index< StringSet< Peptide >, IndexWotd<> > >
 

Functions

template<bool enumerateA, bool enumerateB, typename TOnFoundFunctor , typename TTreeIteratorA , typename TIterPosA , typename TTreeIteratorB , typename TIterPosB , typename TErrors >
void _approximateAminoAcidTreeSearch (TOnFoundFunctor &onFoundFunctor, TTreeIteratorA iterA, TIterPosA iterPosA, TTreeIteratorB iterB_, TIterPosB iterPosB, TErrors errorsLeft, TErrors classErrorsLeft)
 
template<typename TEquivalenceTable >
bool _charComparator (AminoAcid charA, AminoAcid charB, TEquivalenceTable equivalence)
 

Function Documentation

void seqan::_approximateAminoAcidTreeSearch ( TOnFoundFunctor &  onFoundFunctor,
TTreeIteratorA  iterA,
TIterPosA  iterPosA,
TTreeIteratorB  iterB_,
TIterPosB  iterPosB,
TErrors  errorsLeft,
TErrors  classErrorsLeft 
)
inline

References _charComparator().

bool seqan::_charComparator ( AminoAcid  charA,
AminoAcid  charB,
TEquivalenceTable  equivalence 
)
inline

OpenMS / TOPP release 2.0.0 Documentation generated on Sun Jul 31 2016 20:57:14 using doxygen 1.8.11